Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830131.1_cds_XP_016504046.1_17531
CDS Infomation

[gene=LOC107822067] [db_xref=GeneID:107822067] [protein=serine carboxypeptidase-like 20] [protein_id=XP_016504046.1] [location=complement(join(1273..1356,1536..1581,1687..1800,2566..2687,2794..2859,3614..3856,3953..4033,4163..4264,4340..4377,4457..4559,4762..4884,4982..5058,5847..5992,6101..6255))] [gbkey=CDS]
Sequence

ATGGCAAGAAAAAACTCTTATTTTTTACACTATAATATATTACTGTTAAGTTTCTTGGCA
TTTTCATTTCTGGTAATAGAAGGTGTACCTGAGAATGCATTGATAACTCAAATTCCTGGC
TTCAATGGCACTTTCCAGTCAAAGCATTATGCTGGATATGTTACCATAGATGAAAATCAT
GGTAAGAAATTGTTTTACTATTTTGTTGAGTCTGAAAAAGATCCAACAGAAGATCCAGTT
GTTCTTTGGCTCAATGGTGGGCCTGGCTGCTCAAGTTTTGATGGCTTTGTCTATGAGCAT
GGACCTTTTAATTTTGAGTTGGGAAAGACAAGTGAGAGCCTGCCTATTCTGCATAATAAT
CCACACAGTTGGTCCAAGGTTTCCAGTGTAATATATCTGGACTCTCCTGTTGGCGTTGGG
TTTTCTTACTCAGGAAATGAATCTGACTACAAGACAGGAGACTTAAAGACTGCATCTGAT
ACCCACTCGTTTCTCCTCAAGTGGTTTGAGATCTACCCGGAGTATCTCAAGAACCCATTC
TACATATCTGGAGAGTCTTATGCTGGAATATATGTGCCAACTCTGTCTTATGAAGTAGCA
AAAGGTATTGATGCTGGAGTAGTGCCTGTTATCAACTTTAAGGGTTACATGGTGGGAAAT
GGCGTGACGGATGACATAATAGACGGTAATGCTCTTGTTCCATTTGCACATGGTATGGGC
CTCATTTCAGATGAATTGTTTGAGGAAGTTACTACTTTATGCAATGGAAATTTCTATGAA
CCAGCGAGTAATAATTGTTCAGACAAACTAAACCAAGTTGATCAGGATGTTGCGGATCTA
AACTTGTATGACATTTTAGAACCGTGTTACCACAGTAAAGATTCTAGTGTAATTTCCACT
GGTAACTCAAGATTGCCAATGAGCTTTCGGAAACTAGGTGAGACAGAAAGGCCTCTTCCT
GTCAGAAAAAGAATGTTTGGTCGCGCATGGCCTTTTAGAGCTCCTGTAAGAGAGGGACAT
GTCCCAACTTGGCCGGAGATTCTCAATGGTGCCCACGTCCCTTGCACTGATGATCGTGTT
GCTACTGCATGGCTCAACAATGAAGAAGTTCGTAAAGCAATTCATGCCAAAGAAACAACT
GTCACAGGTCCCTGGGAGTTATGCACAGGCAAAATACATCTAATTCATGATTCCGGAAGC
ATGATTAAGTATCACAAAAATCTCACAGCTCGGGGATATCGAGCACTCATATACAGCGGG
GATCACGATATGTGTGTACCATTCACTGGTTCAGAAAAATGGACAAGATCGCTTGGATAT
AAGATTGTTGATGAATGGAGGCCTTGGTATGTAAATGAACAAGTTGCAGGTTTCATACAA
GGTTATGACAACAACCTCATTTTTCTAACTATTAAGGGAGCTGGACACACCGTGCCAGAG
TACAAACCACGAGAGGCCTTGGCGTTTTATGCGCGCTGGCTAGAGGGCAAGAACATATGA

Peptide Sequence

PEP ID

XP_016504046.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tabacum]
Sequence

MARKNSYFLHYNILLLSFLAFSFLVIEGVPENALITQIPGFNGTFQSKHYAGYVTIDENH
GKKLFYYFVESEKDPTEDPVVLWLNGGPGCSSFDGFVYEHGPFNFELGKTSESLPILHNN
PHSWSKVSSVIYLDSPVGVGFSYSGNESDYKTGDLKTASDTHSFLLKWFEIYPEYLKNPF
YISGESYAGIYVPTLSYEVAKGIDAGVVPVINFKGYMVGNGVTDDIIDGNALVPFAHGMG
LISDELFEEVTTLCNGNFYEPASNNCSDKLNQVDQDVADLNLYDILEPCYHSKDSSVIST
GNSRLPMSFRKLGETERPLPVRKRMFGRAWPFRAPVREGHVPTWPEILNGAHVPCTDDRV
ATAWLNNEEVRKAIHAKETTVTGPWELCTGKIHLIHDSGSMIKYHKNLTARGYRALIYSG
DHDMCVPFTGSEKWTRSLGYKIVDEWRPWYVNEQVAGFIQGYDNNLIFLTIKGAGHTVPE
YKPREALAFYARWLEGKNI

Transcript Sequence

Gene sequence data has not been registered.